Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQNPIEIKAKTLEEALIQASIALNCPIINLQYEVIQMPSKGFLNIGKKEAIILVGVKESVKEVKEESVKEIHQNAEEKQSLGIKTPQEEIITPKPPKKTPKEESHNGDKLHEIKQELKDLFSHLPYKINKVEVSLYEPGVLLIDIDGEDSALLIGEKGYRYKALSYLLFNWIHPAYGYS----IHLEISTFLQNQEKVMEAQLQSTIMTVHEVGKGQMKAPDGVLTYIALKKLRKAFPNKYVSIKTNLNDEKYIVINDFNNE |
1EGA Chain:A ((241-295)) | ---------------------------------------------------------------------------------------------------------------------------------------------------GQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSL------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1EGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -7324 for 233 contacts (-31.4/contact) +
2D Compatibility (PS) -5408 + (NN) -1122 + (LL) 14856
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -1298.0 ( -5.57 by residue)
QMean score : -0.075
|
|
|