Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRKKGIILVLSVILIFSIGLLVNNLMTNNKDTAKPKKKTVAAVKKKKETPPKPKEPFNIDFTGDIMFDWDLRPVLAEKGMDYPFNNVREELKSSDYTFVDLETAITTRTKKVPYQEFWIKSDPSSLTALKNAGVDMVNISNNHILDYY--EDGLLDTTAALRANNLAYVGAGKNEDEAYQLKVADIKGNKVGFMSFCHFFPNTGWIADEDTPGVTNGYDLNLVEEKIKEERAKNKDIDYMVVYFHWGVEKTNTPVDYQTQYVKKLVDDNLVDAIVASHPHWLQGFEVYKD------------VPIAY---------SLGNFLFP--DYVS----GHSAETGIYKLNFDQGKVTAHFDPGIISGNQINMLEGSSKTAQLNYLQSISPNATINSNGDISAK |
| 1T71 Chain:A ((2-275)) | -------------------------------------------------------MNSIKFIFLGDVYGKAGRNI------IKNNLAQLKSKY-QADLVIVNAENTTHGKG-----------LSLKHYEFLKEAGVNYITMG-NHTWFQKLDLAVVINKKDLVRPLNLDTSFAFHN--LGQGSLVFEFNKAKIRITNLLGTSVPLPF---------KTTNPFKVLKELILK----R-DCDLHIVDFHAETTS------EKNAFCM-AFDGY-VTTIFGTHTHVPSADLRITPKGSAYITDVGMCGPGFGSVIGANPEQSIRLFCAGSREHFEVSKCGAQLNGVFFEVDVNTK-KVIKTEAIRIVEDDPRYLKQ---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80114 for 1957 contacts (-40.9/contact) +
2D Compatibility (PS) -25678 + (NN) -3287 + (LL) 7544
1D Compatibility (HY) -9200 + (ID) 1900
Total energy: -112635.0 ( -57.55 by residue)
QMean score : 0.308
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