Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVKGDTVGIICCSDGRKKEDENRIALLEQVLKTEFSLQVVFAETIFQKAESPFSGTPQARAIELMKLYQRSDVQMIFDISGGDAANQVLPYLDFDIIRNAQKPFVGYSDLTVILNAIYTKTEQMGYNYQLLHLVGKDSE----LQQSHFRKTFFENR------------------------------VLISGEQLNEFVWRGGEVIGGNIRCFLKLAGTNFMPDF-TNKIILLESLGGKEAKLASYVAQLEQLGAFSKCLGVIVGQHSEAEENGEYERIGRLYQQIGRKYKLPIFRTSEIGHSVDAKPCLIGAKVNVSRETLTNF |
| 3TLA Chain:A ((39-359)) | PLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQ-RKGFKLVSG-KLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNSNSLLPFLDYDAIIANPKIIIGYSDTTALLAGIYAKTGLITFYGPALIPSFGEHPPLVDITYESFIKILTRKQSGIYTYTLPEKWSDESINWNENKILRPKKLYKNNC-AFYGSGKVEGRVIGGNLNTLTGIWGSEWMPEIRNGDILFIEDSRKSIATVERLFSMLKLNRVFDKVSAIILGKHELFDCAGSKRRPYEVLTEVLDGKQIPVLDGFDCSHTHPMLTLPLGVKLAIDFDNKN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TLA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158040 for 2475 contacts (-63.9/contact) +
2D Compatibility (PS) -31068 + (NN) -14895 + (LL) 312
1D Compatibility (HY) -13600 + (ID) 3400
Total energy: -220691.0 ( -89.17 by residue)
QMean score : 0.426
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