Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDIQESVIGIDLGGTKILIGEVTKDGEVLNSKSYPSNTENQTKATETLLKVLADYTQ-NIGFIAPKQTGIGVGLVGRVDHKSGVWLEIEP---GKSNPTPLAGILEAKTGLPVSLGNDVVCATMAEKQFGWGRETNDFIYLNVGTGLAAGFVVDGRITQGGHFNAGEVGHAVVDIHSDVLCGCGRRGCVERLASGLGIKEEALRHLNSYPTSILAETQTELTG---KMVLHAAEQKDELAEKIIDNATFQLANLIMNLVRTTDPECVILGGGVTRNEHFFQKIQDNLQSNTIRFVTKGVVRSKLEKDKVGLIGAAVIGMRLGNEGGKE |
| 2AA4 Chain:B ((2-264)) | -----TTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSPLQAHAQRVAIASTGI---------IRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDG-DITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPV-CGCGRTGCVEAIASGRGIA---------------AAAQGELAGADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQEPAAF---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107483 for 2094 contacts (-51.3/contact) +
2D Compatibility (PS) -28233 + (NN) -18935 + (LL) 4048
1D Compatibility (HY) -10400 + (ID) 4500
Total energy: -165503.0 ( -79.04 by residue)
QMean score : 0.472
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