Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPSMKRQIAQTGIIHRPLPIETEHALETLAKKKQVLSSRTLFSSKQHVSLEFTHQGAGDFTISGQDEIKLSSPVVMPHWPAGAPDDGDYTNFGNVTISASIGNEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGTVKVPDIYGREGVHGVNLINHEWNDVIFEIEGLPRDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWLPQNNTLIYSHNGYSKDMPKVAFCANKHAATTFTIHDKETDKVVFTGKSYQNATETGNFVILDFSDLQTVGEYYLKFADMQTEIFQIGTSEVIWESSIWKSLNFIFCERCGCPVF-----GKHTTCHADIIAEHDGKQLSFNGGWHDAGDVSQQLIQTAEVTMALYEMAASLPEKE--ETLRMRLLEEGEWGLDFILKTRFGDGFRATSAG-----MTRWTDGLVGGMDDAIARV----H---NQAYENFYCAGIEAYIGSQIAD-NATMQNHLLRIAEEDLLFAIKELEKHGTSQKPIFWEHTYQTSESLYYATASWAASMVYQLTNKEIYAEKAAEWLDLMLEAQEKAGIRDSETSELYKGFFYRDKSHKVIQHFNHQAREHLYLLALEAALETQPSHAEKQTWLQAVEMYGDYLKKV-TRFTKPYPLIPAGLYKKDEYLDEASFHLQHLLIDERAIEEYQLQFEQGIKINDEVALRKFPIWFSFRGNNAILLSAGKAASIAGKIL-KDKALLDIAEGQLQWVIGMNPFGQSMMHGEGYRYAQQYSV--LNGE------------ITG---EIPVGMETF-RNEDEPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITGKS |
| 3WC3 Chain:A ((6-435)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YNYDEVLEKSILFYEAERSGDL-PANNRIPYRGDSALGDQ---GNQGQDLTGGWYDAGDHVKFGFPMAFATTTLAWGILEFRDGYEAAGQYNLALDSIRWTLNYFLKAHVSDNEFYGQVGDANTDHAYWG----RPEDMTMERPAWSISPSAPGSDLAAETAAALAAGYLVFRDSDAAFANNLLAHSRTLYDFALNNRGI--YSQSISNAAGFYAS--SAYEDELAWGAAWLYRATEEQEYLDRAYEFGTTTN---------------TAWAYDWNEKIVGYQ--------------LLLTT--SAG----QTDFLPRVENFLRNWFPGGSVQYTPLGLAW-------------------------------------------LA-----QW----GPNRYAANAAFIALVSAKYNILASESEQFARSQIHYMLGDA--GRSYVVGFGNNPPQQPHHRSSSCPDQPAECDWDEFNQPGPNYQILYGALVGGPDQNDQFEDLRSDYIRNEVANDYNAGFQGAVAALRAIQL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WC3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94748 for 3707 contacts (-25.6/contact) +
2D Compatibility (PS) -41525 + (NN) -19610 + (LL) 25280
1D Compatibility (HY) 4000 + (ID) 3950
Total energy: -130553.0 ( -35.22 by residue)
QMean score : 0.353
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