Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSNFTAKVPLSERMADVLISKDRWKDDEEGYLKVKYGLEIILINVMKFALVYGIALVTGLLLQTVTVHLSYLWLRRYSFGLHATKTLNCTLISLLMFVLAPFVFQNIPSNNWIVLGTFGFILLNMFLFAPADTESLPLIGEEHRKTLKRKAMIGTLILTGIALLIPFAEMKTLIMVGSLFQVISINPLTYKLLKRRYRNYEKYE |
| 3W1S Chain:B ((25-49)) | -----------DSMDDLLIRRLTDRNDKEAHLNELF------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3112 for 89 contacts (35.0/contact) +
2D Compatibility (PS) -2701 + (NN) 436 + (LL) 16184
1D Compatibility (HY) -1200 + (ID) 350
Total energy: 15481.0 ( 173.94 by residue)
QMean score : 0.268
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