Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVIFLKDVKGKGKKGETKNVADGYANNFLIKNGYAVEANNAALSTLSAQKKKEDKLAAEELAEAKALKEKMENLTVELKAKSGEGGRLFGSITSKQIAQTLEKTHGIKIDKRKMDLPEAIRALGHTKVPVKLHHEVTATLDVHVSEE
2HBA Chain:B ((1-52))
MKVIFLKDVKGMGKKGEIKNVADGYANNFLFKQGLAIEATPANLKALEAQKQ------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HBA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14453 for 324 contacts (-44.6/contact) +
2D Compatibility (PS) -5450 + (NN) -1726 + (LL) 7660
1D Compatibility (HY) -6000 + (ID) 1950
Total energy: -21919.0 ( -67.65 by residue)
QMean score : 0.680
(partial model without unconserved sides chains):
PDB file :
Tito_2HBA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HBA-query.scw
PDB file :
Tito_Scwrl_2HBA.pdb
: