Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKNFKKLKSLHELPTPLILYNCWDVASARAIQQGGAPVIATSSYAIAESLGAVDGEHLTFDEMFSVISRIAENVSLPLTVDIETGYARNLEELAQNVERLLAIGVCGVNLEDQLIGVTNPGLCSTEEQCDKIKTIKETAAKMSTEIFINARTDVFFQGRDEAVD--LVEEAISRANAYKEAGADAIFIPGLLSPNLIRAFVEKSPLPVNVMRMDGMLSNEDLQKIGVKRISYGPFSFFQANLAIQQEVERIFEGGKAL
4MG4 Chain:H ((18-249))
-------FRSLHRAGQPLALFNVWDAGSARVVADAGAVALATGSWSVAAANGF-----MPRALMMEVLERIVRATDLPVTVDLESGYGERPEDVAETIAMSIRAGAIGCNLEDSFPSTGE--LRDVDEAAARIAAARQAADRAGVDYFINARTDVFFKAATETHDERLLDATLARARAYAAAGADGLFVPGLRSPALIRALTAASPLPVNVMRVAETPTLAELAEYGVARISHGPYPYLQA------------------
General information:
TITO was launched using:
RESULT:
Template:
4MG4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158697 for 1945 contacts (-81.6/contact) +
2D Compatibility (PS) -24687 + (NN) -11173 + (LL) 1948
1D Compatibility (HY) -14800 + (ID) 4650
Total energy: -212059.0 ( -109.03 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_4MG4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MG4-query.scw
PDB file :
Tito_Scwrl_4MG4.pdb
: