Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLKQLTNQLFTSTIFLVTMLFIIPPTFAIADGSKVSFYEYIYGAPLRWLTVIS-----TTEKKGAFLEMFFSENEGINIQWLNLIINFLLVFLVITIIFSLAKKFYNKKNA
1Z4H Chain:A ((1-66))
------MQHELQPDS--LVDLKFIMADT----GFGKTFIYDRIKSGDLPKAKVIHGRARWLYRDHCEFKNKLLSRANG-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z4H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11965 for 368 contacts (-32.5/contact) +
2D Compatibility (PS) -6408 + (NN) -2347 + (LL) 5588
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -19082.0 ( -51.85 by residue)
QMean score : -0.033
(partial model without unconserved sides chains):
PDB file :
Tito_1Z4H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z4H-query.scw
PDB file :
Tito_Scwrl_1Z4H.pdb
: