Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFLEFHQLVKEDLLIYSWIIKNFHLTRQKLMAGGEITMNR-----EQVIVMEKGLLVQVN--EEGKNDLYRVFIDQRIIFTTK-----GDITLTALEDTSYSIIRTDELIGKLEDQHLLPTFFLQIAEDFEKGLDWQR-TLISVDPAERAEMILVKIIERYEINSENKPEFPRWLRINVLARFAKCSVSTMSSVVNELVNEGDLNIKGTPWLLTRPYQASCA
2ZCW Chain:A ((6-192))
--------------------------ETVSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAATDVRLEPLPEN-------PDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHE-EEGKVVLKATHDELAAAVGSVRETVTKVIGELAREGYIRSGYGKIQLLDLKGLK--
General information:
TITO was launched using:
RESULT:
Template:
2ZCW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109630 for 1237 contacts (-88.6/contact) +
2D Compatibility (PS) -18544 + (NN) -3286 + (LL) 3908
1D Compatibility (HY) 2400 + (ID) 1300
Total energy: -126452.0 ( -102.22 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_2ZCW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZCW-query.scw
PDB file :
Tito_Scwrl_2ZCW.pdb
: