Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------MSDLF---LELNGKVH----------------S-L-SETFPGLSVQ---------EVSRQSPQLSMETAEIAGTDGVIPGMTQFKPFIFSAKCNLQALDIPDYHLAVREIYEFLFQRD-SYYIWSDQMPGIR-YEVH-----PKPVDFS-R-----ESDRVG----LLTIEFDVFKGYAESRGTSLDPMTFEVD------LWQM---GMNL-SNRDDLFYIFKEN-TFRVYNAGSDRVNPLMRHELD---IAMTA-NGTPTIHNLTT------------GESFEYQKELRKTDVLLLNNIYPLVNNRRVG-KDTNHGIITLEKGWNDFEIKGVTD-----VTIAFNFPFIYR------ |
| 3B7F Chain:A ((16-393)) | SAPESGPVMLLVATIKGAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTLGPTVFRSDDGGGNWTEATRPPAFNKAPGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMDRREGVWKRIGDAMPREVGDIG----FPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTD-------QAWLTVKRQAMTADAHAPVGVYFGTTGGEIWASADEGEHWQCIASHLPHIYAVQSARP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B7F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11189 for 1786 contacts (-6.3/contact) +
2D Compatibility (PS) -26923 + (NN) 5858 + (LL) 952
1D Compatibility (HY) 4000 + (ID) 2650
Total energy: -29952.0 ( -16.77 by residue)
QMean score : 0.114
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