Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYVIIQSMDKEVEEILTDIDYGSFSYDYE-KNTSRAISFTVNKTKQNAAIFDLVGNEAILTYQGQQFV---IKKCTPKSIGGTLSKQITAQHICYTVQDHVQYNVKSGRKKYSIQTVLEFALQDNVLGFSYEI---QGSFPLVELEDLGNKNGLELVNLCLEEFGAILFADNK-KLYFYDEKSWYVKTEKQFRYLYNTEEVSVDTNTDNLKTEIKCYGKQKENADKLTGDNKYMAVVTYTSPNEAIYGKRMANAKSDDKITNNDDLLIFAKKQILDVPETALTISYKGKEPVSERDVWYFIHEPMGFETEVKVTKIKSSHPWSKKFQEIGFSNSRRDMVRIQTQIANQVKKASVDTNKINSFSSIAMNAYDSRILTEVVGVVDGD |
| 1WRU Chain:A ((3-346)) | -NTVTLRADGRLFT------GWTSVSVTRSIESVAGYFELGVNVPPGTDLSGLAPGKKFTLEIGGQIVCTGYIDSRRRQMTADSMKITVAGRDKTADLIDCAAVYSGGQWKNRTLEQIARDLCAPYGVTVRWELSDKESSAAFPGFTLDHSETVYEALVRASRARGVLMTSNAAGELVFSRAAS---TATDELVLGENLLTLDFEEDFRDRFSEYTVKSRKGTATDSDVTRYRPMIIIADSKITAKDAQARALREQRRRLAKS-----------------ITFEAEIDGWTRKD--------GQLWMPNLLVTIDASKYAIK-TTELLVSKVTLILNDQDGLKTRVSLAPREGFLVPVESD------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 25489 for 2490 contacts (10.2/contact) +
2D Compatibility (PS) -33359 + (NN) -1338 + (LL) 5244
1D Compatibility (HY) -1200 + (ID) 1450
Total energy: -6614.0 ( -2.66 by residue)
QMean score : 0.222
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