Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVILKFGILGFGAIFGYLFGEVDLLV----KVLVCFI-----VADY---ISGLLASGYLGELSSKMGFKGIAKKIAILILVAIAHQIDLIL----GTHNTTRDAVIFFYLANE-----LISILENFVRMGMK-------VPEVLKNLILIFDAKSGEDEEKHDKDMD
1WLJ Chain:A ((6-178))
EVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQRIRARRGLPRLA
General information:
TITO was launched using:
RESULT:
Template:
1WLJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128240 for 1031 contacts (-124.4/contact) +
2D Compatibility (PS) -14672 + (NN) 2070 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -145092.0 ( -140.73 by residue)
QMean score : 0.164
(partial model without unconserved sides chains):
PDB file :
Tito_1WLJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WLJ-query.scw
PDB file :
Tito_Scwrl_1WLJ.pdb
: