Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEIKVKEATLAKYATKLESKGKSTEYLPMKGGNMSYSQANSINHFRTALFDLVDAVDNFQGVVGTDAKRLKELGASFTRKDQELERSMGLGGK
2V6Y Chain:A ((1-75))
MSAQVMLEDMARKYAILAVKADKEGK------------VEDAITYYKKAIEVLSQIIVLYPES--VARTAYEQMINEYKKRISYLEKVL-----
General information:
TITO was launched using:
RESULT:
Template:
2V6Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 735 for 495 contacts (1.5/contact) +
2D Compatibility (PS) -8180 + (NN) -4326 + (LL) -36
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -15607.0 ( -31.53 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_2V6Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V6Y-query.scw
PDB file :
Tito_Scwrl_2V6Y.pdb
: