Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MPDWDF-NNPESMKAWDLASGSYAEQVSG
4B2V Chain:A ((1-32))
SECVENGGFCPDPEKMGDWCCGRCIRNECRNG
General information:
TITO was launched using:
RESULT:
Template:
4B2V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7851 for 142 contacts (55.3/contact) +
2D Compatibility (PS) -2844 + (NN) -129 + (LL) 0
1D Compatibility (HY) -800 + (ID) 350
Total energy: 3728.0 ( 26.25 by residue)
QMean score : -0.210
(partial model without unconserved sides chains):
PDB file :
Tito_4B2V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B2V-query.scw
PDB file :
Tito_Scwrl_4B2V.pdb
: