Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------LIMNANLEVN---------AELVKESY--VYLLSRYLVLRQENFDTKE----DKIPYNTLKHNSVSPADANFVNPNFDVVYSEAWIAVDDEHAVVLEVPEI---KNRYYTVQLLDGWGEVVTNINERNFPEHPHGK---FAFVKKGTNPSIPSDAIKIELPSEKVKVLLRVEQKDDPE-GAVKLQKAFKFDAPDNIKIKEPLEIPHFTNAEFLLEEIYSNLEELLATYPDKMPKAAEFQDKARKVAAYIELGDDQKAEVRNLIVKEALPYFTNGAKGFGTQKGGWSVTY-VAGAFENDILARAII-----NYGGIWANSIQE--ALYFIGQKGTDD-ELLTGDKIY-----KIHFSADE-LPAELANAFWSVTLYSVPD------YHVIPNELNKF-----CINNYTGPKLSEDGSLTLYIASEKPADVDPGNWLPSKAGKEFSLNF---RLYVPKKEVLEGKVFLPPLEVF |
| 4PXG Chain:A ((26-509)) | TKQAVHNRAKEAVGKSVLELNGGESIKSSVGDAFENWFGVALKATPFKKLKNGKYSSKERLVLNIINYEKVANENFETSSFLSKNNTIELAFYEYIKGTPSDNWIIKEAVLYEMHKNPIDYEIIKQDWEIINQYINEGKAHELSEGLTSYLAPCTKGAN----ASSLRNQ-PYSDIKAKQRAFSLKSGYMTSILRKYVLGDEKIDSI-VKDPFEIKEKSIEDIVFEKFQPYINWSIDKLCEHFSINKGEKGLNYRIASAILNLKGKTTKSKPFPEVEEFEKSSIVVKTVHFNKKNVNKESMSFGAFKFEELANEEWEDSEGYPSAQWRNFLLETRFLFFVVKEDEDGVDIFKGIKFFSMPEEDINGPVKRMWDDTVKKLKEGVTLEAVPDKSTKDGWRIKNNFVDKSDDLICHVRPHTNNRDYRGGSN----ADKLPKKI---NWINRPDSDDYSDEWMTKQSFWINNDYIKKQVEDLL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PXG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2375 for 2927 contacts (-0.8/contact) +
2D Compatibility (PS) -42100 + (NN) -8761 + (LL) 876
1D Compatibility (HY) -8800 + (ID) 3450
Total energy: -64610.0 ( -22.07 by residue)
QMean score : 0.174
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