Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSGKPVIHEFIVVEGRDDTTAINRSVIADTIETNGSALSQETIEKIRHAQE-LRGVIIFTDPDFPGEKIRKQIDSAVPGCKHAFINRQDALPKAGRGLGVEHASSANIREALENFHTSGAPTEKQFISKDILVHLGLLGGVGAKERREKIGNILKIGYTNGKQLQTRLESFAISEEQLVAACQKIMQEEENE
1GKU Chain:B ((610-676))---------------------------------------RSRIEALRKLAHDAEFVIVGTDPDTEGEKIAWDLKNLLSGC----GAV--------KRAEFHEVTRRAILEALESLRDV--------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1GKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10595 for 390 contacts (-27.2/contact) +
2D Compatibility (PS) -7361 + (NN) -2450 + (LL) 8596
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -16010.0 ( -41.05 by residue)
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_1GKU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GKU-query.scw
PDB file : Tito_Scwrl_1GKU.pdb: