Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQGDMKINATGTGAISPVNTQVPD---YDELQLVAQMDELDIPNIKKDQEVKVTVTALPDKTYTGKVKEIAEQGQVQNGVSSFSVII-SLDKTDDLKAGMTADASILVNEKKDALYVPIEAVQKDSDDKYYVLVPEEKDNGKTKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETSTVPGAPS |
3NE5 Chain:B ((215-392)) | -------------------------------------------DGVITAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIAWLVKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATRT--LQLRLEVDNADEALKPGMNAWLQLNTAS-EPMLLIPSQALIDT-GSEQRVIT----VDADGRFVPKRVAVFQASQGVTALRSGLAEGEKVVSSGLFLIDSEANIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NE5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22532 for 1024 contacts (-22.0/contact) +
2D Compatibility (PS) -18957 + (NN) -6708 + (LL) 5048
1D Compatibility (HY) -2800 + (ID) 1650
Total energy: -47599.0 ( -46.48 by residue)
QMean score : 0.339
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