Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQGDMKINATGTGAISPVNTQVPD---YDELQLVAQMDELDIPNIKKDQEVKVTVTALPDKTYTGKVKEIAEQGQVQNGVSSFSVII-SLDKTDDLKAGMTADASILVNEKKDALYVPIEAVQKDSDDKYYVLVPEEKDNGKTKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETSTVPGAPS
3NE5 Chain:B ((215-392))-------------------------------------------DGVITAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIAWLVKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATRT--LQLRLEVDNADEALKPGMNAWLQLNTAS-EPMLLIPSQALIDT-GSEQRVIT----VDADGRFVPKRVAVFQASQGVTALRSGLAEGEKVVSSGLFLIDSEANIS


General information:
TITO was launched using:
RESULT:

Template: 3NE5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22532 for 1024 contacts (-22.0/contact) +
2D Compatibility (PS) -18957 + (NN) -6708 + (LL) 5048
1D Compatibility (HY) -2800 + (ID) 1650
Total energy: -47599.0 ( -46.48 by residue)
QMean score : 0.339

(partial model without unconserved sides chains):
PDB file : Tito_3NE5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NE5-query.scw
PDB file : Tito_Scwrl_3NE5.pdb: