Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVTTSPNIEGKQIIEYKKIVFGEVITGVNFMKDIGAGLRNFFGGRSQGYEDELINAREEAIREMEQRAKDIGANAVIGVDIDYEVLGADNGMLMVTASGTAVVIEAQDY
1VR4 Chain:A ((1-103))
MIVTTTSGIQGKEIIEYIDIVNGEAIMGANIVRDLFASVRDVVGGRAGSYESKLKEARDIAMDEMKELAKQKGANAIVGVDVDYEVVRD--GMLMVAVSGTAVRI-----
General information:
TITO was launched using:
RESULT:
Template:
1VR4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45232 for 687 contacts (-65.8/contact) +
2D Compatibility (PS) -11245 + (NN) -3478 + (LL) 228
1D Compatibility (HY) -10800 + (ID) 2850
Total energy: -73377.0 ( -106.81 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_1VR4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VR4-query.scw
PDB file :
Tito_Scwrl_1VR4.pdb
: