Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKS-KFNGMTSEIIVGGEKMILVKPLTFMNASGECIRPLMDYYNIPIEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQHV-KTQEFNRIRVGVSRP-LKGEVINYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIEVMNKYNQK
4P7B Chain:C ((9-180))
IKLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMASFYRIQPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTE-----------------
General information:
TITO was launched using:
RESULT:
Template:
4P7B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106482 for 1348 contacts (-79.0/contact) +
2D Compatibility (PS) -17640 + (NN) -793 + (LL) 1252
1D Compatibility (HY) -11200 + (ID) 3550
Total energy: -138413.0 ( -102.68 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_4P7B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4P7B-query.scw
PDB file :
Tito_Scwrl_4P7B.pdb
: