Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATTMRLDKYLKVSRLIKRRTVAKEVAEKGRIAVNGVTA-KPGTNVKSGDELVIRFGPKIVTAKIERLEENAKKEQATEMYTIIKEERTDESR
3J7A Chain:E ((105-162))
--LERRLQTKVFKLGLAKSVHHARVLIRQRHIRVGKQMVDIPSFLVRVDSEKHIDFATTS---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3J7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21659 for 372 contacts (-58.2/contact) +
2D Compatibility (PS) -6023 + (NN) -1439 + (LL) 3596
1D Compatibility (HY) 0 + (ID) 600
Total energy: -26125.0 ( -70.23 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_3J7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7A-query.scw
PDB file :
Tito_Scwrl_3J7A.pdb
: