Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTWVIRVCFLILGGTTGVFSLPALWVKLGIGHILLINNPYTDALIGALIFYLITFWAVKYVEAALNWLEEKLAKIAIATLVYGGLGLFVGLVIAFFASNALSQTNIPLLNSVVPVILTLVLGYLGFRIGISRRNEFGNFVNNRNAKKRTPEEEKTEEKSKKTYKILDTSVIIDG---RI----ADILTTGFLDGTVVIPLFVLAELQHIADSSDTLKRTRGRRGLDILNR-IQK--EDA-IQV--EMYE------GDF----EDTPEVDSKLVKLAKVMGGIVVTND-YNLNKVCEFQNVPVLNINDLANAVKPVVLPGEKMTVLMVKDGKEHNQGVAYLDDGTMIVVEDGRKFINETIQVEVTSVLQTSAGRMIFAKPS |
| 2H1C Chain:A ((2-129)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------ILLDTNVISEPLRPQPNERVVAWLDS-LILEDVYLSAITVAELRLGVALLLNGKK--KNVLHERLEQSILPLFAGRILPFDEPVAAIYAQIRSYAKTHGKEIAAADGYIAATAKQHSLTVATRDTGSFFAA-------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55491 for 640 contacts (-86.7/contact) +
2D Compatibility (PS) -11017 + (NN) -3372 + (LL) 19564
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -52466.0 ( -81.98 by residue)
QMean score : 0.511
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