Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKAKQIYLEFKREADFLELDFPLFLGDGPGFGELCMDYSEQDGYMLYGYEHGKRNSEFKTTDFDEFKYEVFLHICWYMGMEFELRHRKEDIERDDNILETDTRKIAFEKTLQLLKMVNPAWIDKAAIGYSNYLNLWRKNKNVYFDKEAMQFKVNL |
| 1SGO Chain:A ((69-136)) | -------------------------------------ETKERNRYCLELTEAGLKVVGYAFDQVDD----------------------HLQ-------------TPYHETVYSLLDTLSPAYREAFGNALLQRLEALKRD---------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1SGO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 7794 for 362 contacts (21.5/contact) +
2D Compatibility (PS) -6800 + (NN) 3 + (LL) 7012
1D Compatibility (HY) -1200 + (ID) 600
Total energy: 6209.0 ( 17.15 by residue)
QMean score : 0.217
|
|
|