Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVLEAKQSAVEEIKTKLSASASTVIVDYRGLNVGEITDLRKQLRDAGIEFKVYKNSLTRRAVEAN-----GYEGLEGALTGPNAIAFSNEDVVAPAKILNDFAKDHEALEIKAGVIEGKVASLEEIKALATLPSREGLLSMLCNVLQAPVRGLAIATKAVADQKEGQEA
3J16 Chain:G ((1-105))
MGGIREKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAV-VLMGKNTMVRRAIRGFLSDLPDFEKLLPFVKGNVGFVFTNEPLTEIKNVIVSNRV-----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3J16.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18440 for 599 contacts (-30.8/contact) +
2D Compatibility (PS) -10738 + (NN) -3413 + (LL) 5716
1D Compatibility (HY) -8400 + (ID) 1050
Total energy: -36325.0 ( -60.64 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_3J16.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J16-query.scw
PDB file :
Tito_Scwrl_3J16.pdb
: