Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEKKILVVDDEKPIADIVKFNLNKEGFDVYCAYDGDEALELVEEVQPDLILLDIMLPGRDGIEVCREVRKKYDMPIIMVTAKDSEIDKVIGLELGADDYVTKPFSNRELIARVKANLRRHSQVSSSTAEEEENSELEIGSLIIHPDAYVASKRGETIELTHREFELLHYLAKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHPAWLVTRRGVGYYLRNPEQE
2ZWM Chain:B ((2-120))
--DKKILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLRRQ--------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80558 for 958 contacts (-84.1/contact) +
2D Compatibility (PS) -13088 + (NN) -7597 + (LL) 8796
1D Compatibility (HY) -17200 + (ID) 4950
Total energy: -114597.0 ( -119.62 by residue)
QMean score : 0.655
(partial model without unconserved sides chains):
PDB file :
Tito_2ZWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZWM-query.scw
PDB file :
Tito_Scwrl_2ZWM.pdb
: