Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIKKYEPLNLYTNFKKSAERYPEMPIHFDEELVTFPELGLHSTYKKCEEAIIQKAAHLHKFGVRKEEKVIVYKSAKFDSYILAVAISYIGAVPIMVSPHLPASTIDIFVNRLDQPWLLFDSETSDKSHQLN------NLPD-----SR--LIN-----------------AEQLFKAPLDGYTCEQEELPKDMIAYMTHTSGTTGVPKLIAHSANSMGWRTKYQ-RRILNFIKPRGLVAFHISPVHSRFN-IGVSSLMSLGFPLLPIAN----PSKANVEKVLREYKPYVLETHPNHFVQWASLARE--KPDVFQSIKFYHSTFDAINKETMAVFLRTSEYKKPLFLQIYGQSECGPMILRGHTLQSIETLNARDMGIGVPGLTEVRIVDQDGNPVPAGVSGNIQMLSK--GRALTYYKEEARFEENVY---GPWWDSGDYGMKDEKGRLFLQDRQVDLVETIDS---TLAIEDKLLDTLTFLDEVVIIRGEN--GSPQ--PIIAVHNDGE---MNWDAWWKAV-SDLPHMNEP-MVMKYDEIPRTATMKVQRLQMERELKK |
| 1PG4 Chain:A ((78-630)) | ----------AANCLDRHLQENGDRTAIIWEGDD--TSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKA--SPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVF-DYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGA-IE-LKAGSATRPFF-GVQPALVDNEGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVA-HPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217480 for 4152 contacts (-52.4/contact) +
2D Compatibility (PS) -51991 + (NN) -16417 + (LL) 916
1D Compatibility (HY) -15600 + (ID) 4100
Total energy: -304672.0 ( -73.38 by residue)
QMean score : 0.444
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