Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLYTMKDLLAVGKEHQFAVPAFNICSFDMLKAIMEEVEANNAPVILEIHPDEIEYLGDNFVATVRE-----YAYRSKVPVVIHMDHGGTIKDVMRAIRNGYTSVMIDASRASYEENVALTTQVVELAHKVGVSVEAELGTIGNNGSAEGGADTIIYTDPDQAEDFVSRTGIDTLAVAIGTAHGLYPKDKKPELNMPLLKELNKRLDIPFVLHGGSGNPDKEVSESVQYGVRKVNLSSDLKSVFFEEVRRVLVDNPAMYEPNQVYPSANEKVKDVVRHKLDILNTTGQADKY
4TO8 Chain:B ((3-285))-LVSMKEMLIDAKENGYAVGQYNINNLEFTQAILEASQEENAPVILGVSEGAARYM-SGFYTIVKMVEGLMHDLNITIPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHSPFEENVATTKKVVEYAHEKGVSVEAELGTVGG---DDVVADGIIYADPKECQELVEKTGIDALAPALGSVH--------PKLGFKEMEEIGLSTGLPLVLHGGTGIPTKDIQKAIPFGTAKINVNTENQIASAKAVRDVLNNDKEVYDPRKYLGPAREAIKETVKGKIKEFGTSNRA---


General information:
TITO was launched using:
RESULT:

Template: 4TO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136758 for 2384 contacts (-57.4/contact) +
2D Compatibility (PS) -29720 + (NN) -14343 + (LL) -92
1D Compatibility (HY) -21600 + (ID) 5350
Total energy: -207863.0 ( -87.19 by residue)
QMean score : 0.642

(partial model without unconserved sides chains):
PDB file : Tito_4TO8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TO8-query.scw
PDB file : Tito_Scwrl_4TO8.pdb: