Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVKDILTKELVVFDLEATTKETAIEEMAEMLDERGILADKATYVQAVLEREAHSTTGIGNNIAIPHGKSESVTKSAI-VFARTKEMIEWESLDDEPVNMIFLLAITDSDKTDGHLKILAEIATKLMDDDIVESLKNTRDKEEVIRILNGGVVEI
1A6J Chain:B ((8-153))
LQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLSLPPQVVF-EAILTREKMGSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQPVDLLFAL-LVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQII-------
General information:
TITO was launched using:
RESULT:
Template:
1A6J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89621 for 1154 contacts (-77.7/contact) +
2D Compatibility (PS) -15908 + (NN) -7289 + (LL) 604
1D Compatibility (HY) -11600 + (ID) 2350
Total energy: -126164.0 ( -109.33 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_1A6J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A6J-query.scw
PDB file :
Tito_Scwrl_1A6J.pdb
: