Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKGLKKMKYSIQFSDAIHILAYIEIFKNTNLLSSEIIAGSVKTNPANIRRIMSNLKKANLITTQTGKAN-PILTKPPEEISLLDVYKSIEGNTNLIHVDPK-T---NPDCIVGANIQQVLSSKYELLQQKIELEMDEIKLDSIIHDISVLESKDRPQNNEFITKFL
3K69 Chain:A ((7-152))
--------MKLDFSVAVHSILYLDAHR-DSKVASRELAQSLHLNPVMIRNILSVLHKHGYLTGTVGKNGGYQLDLALADMNLGDLYDLTIPPTISYA-RFITGPSKADQSPIAANISETLTDLFTVADRQYRAYYHQFTMADLQADLNHHGT--------------
General information:
TITO was launched using:
RESULT:
Template:
3K69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59766 for 887 contacts (-67.4/contact) +
2D Compatibility (PS) -14681 + (NN) -6536 + (LL) 1528
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: -87305.0 ( -98.43 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_3K69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K69-query.scw
PDB file :
Tito_Scwrl_3K69.pdb
: