Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSVMWFRRDLRVNDNKALYHACKEDD--LLLLFQVNPAQFITG--SPSHQAFFASVAHFKQEVDKTALLQIMFGE------PVECLKQLKETLPSWDKVYFNRDETGYGAERDEAAKTFFDEQEIE---VQAFHDSYLHSAEEVKKSPTEYYKIFTPYYKKWREEIKETPFKVTLKADNIRKENLF---PKYEEQFAEMTCDLPILDSGEKTANTRLANFIKHDVADYDKARDFPELDKTSHLSRYLRTGEISVRTIWQAL--QENEATEGRA--IFEKELCWRDFYNMIYVSFPN-QKNEPIQENYRFIEWENNREFFKAWQEGKTGFPLVDAAMRQLKETGWMHNRLRMVTASFLTKDLLIDWRFGEKYFQQMLIDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDPTGKFIRKYVKELANLPDKFIHQPEKMSEIEQKEYGLLLGKDYPFPLIDHKERRKLAIARYEFSKEHYRGNI |
| 1DNP Chain:B ((2-469)) | -THLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAE-NSVTHLFYN-----YQYEVNERARDVEVERALRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREG-MPECVAAPKVRSSGSIEPSPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQNGAGEYEQQRDFPAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLNELIWREFYRHLITYHPSLCKHRPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDHEGEFIRQWLPELRDVPGKVVHEPWKWAQ----KAGVTL--DYPQPIVEHKEARVQTLAAYEAARK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104436 for 3735 contacts (-28.0/contact) +
2D Compatibility (PS) -47695 + (NN) -16784 + (LL) 824
1D Compatibility (HY) -34000 + (ID) 9250
Total energy: -211341.0 ( -56.58 by residue)
QMean score : 0.380
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