Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNEYKFETIQVHGGHTPDGDTHSRAVPIYQTTSYTFDSPEHAAALFGLQETGNIYTRIMNPTTAVLEERLTLLEGGIGAVATASGMAAITYSILNIAGSGDHIVAAATLYGGTHTLFSHTFKTFGIDVTFVD-PNEPENFEKAIKDNTKAVFIETIGNPDINIVDIEKVAKIAHASDIPLIVDNTFATAYLNRPFDFGADIVVYSATKFIGGHGVAIGGAVIDSGKFNWANGKFPKLVVPDDSYNGLSYTNDVGAAAYITKLRVSLLRDTGAALSPFNAFLLILGLETLSLRLEQHVKNAKQVANFLNDHPKVAWVNYPGLKDNKYHELAQKYLPKGPGSIFTFGVKGGYEAGKKVIESVELFSHLANVGDAKSLIIHPASTTHQQLSEEQQLTAGVKPESIRLSIGIENADDIIQDLTKALEQI
4KAM Chain:D ((20-433))----WSFETKQIHAGQ------NARALPIYQTTSY----------------------RLGNPTTDVVEQRIAALEGGVAALFLSSGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYSLAKLGIEVSFVDDPDNLDSWQAAVRPNTKAFFGETISNPQIDLLDTPGVAEVAHRNGIPLIVDNTIATPYLIRPFTQGADIVVHSATKYLGGHGAAIAGVIVDGGTFDWTQGRFPEFTTPDPSYHGVVFA-ELGAPAYALKARVQLLRDLGSAASPFNAFLVAQGLETLSLRIERHVSNAQRVAEFLADREDVVTVNYAGLPGSPWHERAKKLSPKGTGAVLSFELA------KAFVNALKLHSHVANIGDVRSLVIHP------------------SPGLVRLAVGIEGIEDILADL-------


General information:
TITO was launched using:
RESULT:

Template: 4KAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -238722 for 3242 contacts (-73.6/contact) +
2D Compatibility (PS) -39576 + (NN) -25908 + (LL) 3148
1D Compatibility (HY) -34000 + (ID) 9750
Total energy: -344808.0 ( -106.36 by residue)
QMean score : 0.569

(partial model without unconserved sides chains):
PDB file : Tito_4KAM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KAM-query.scw
PDB file : Tito_Scwrl_4KAM.pdb: