Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNVLFIKANGLPAERSVSVALYEIFLTEYKKSHPDDNVTELDLFEADLPYYDVTMMSGLHKEAAGETLSPEEKRLADIANSYLDQFLAADKIVMAFPLWNFSIPAQFLTYLFYLNQAGKTFKYTANGPVGLVADKKIALLNARGGIYSDGPMQSFEMSLNYVKNVLAHFGISEPEMVIVEGHNAKPDQAKDIISAGAKEAVELAKIF
3W77 Chain:B ((2-208))
-ATVLFVKANNRPAEQAVSVKLYEAFLANYKEAHPNDTVVELDLYKEELPYVGVDMINGTFKAGKGFDLTEEEAKAVAVADKYLNQFLEADKVVFGFPLWNLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGVYSEGPAAEVEMAVKYVASMMGFFGATNMETVIIEGHNQFPDKAEEIIAAGLEEAAKVASKF
General information:
TITO was launched using:
RESULT:
Template:
3W77.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131153 for 1623 contacts (-80.8/contact) +
2D Compatibility (PS) -22563 + (NN) -13416 + (LL) 208
1D Compatibility (HY) -21600 + (ID) 5700
Total energy: -194224.0 ( -119.67 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_3W77.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W77-query.scw
PDB file :
Tito_Scwrl_3W77.pdb
: