Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MWKKHKWLIIAVLLLVIYVAPLFILGGNSHVRIHDNLDSNVTWYKMVLDSGDYTAKVGTANIDQIMDDSVPRDSFDSEFVGIDWLYMIFSTPIAFAMSQLITRVFAFLGLFLWARDYLIKDKKYLVPIYFVSLAFALTPFWP---------SGMLSTLGMPLALWAFLNIRNNKRRIWNVVILTLLPFYSSLILGFCFFLVMVGCIWLYDVFKKKQVHIRFLLSMLYMGLIYVIVNYRFIYAMFLHPEPDSRSEFSLPNLSFLSSIRLSFKNFIFGHTHDQALAGYVILPILLLVLVLIIIKREWVKEKLFLWLFGFNLFLSFWYGFWWYRGWNVIKEHVEIMRTFNFSRFHFLQPFLFYGLFALAIVYLIKKGNWWRKLAYVAIVLQLIVVFANNSEIYYRTGNGSPSINQFYATEQMEEIKDYIGKPQSSYRVGSIGLHPSVSQESGFYTVDGYVNSYPLAYKRAFRKIIAGELDKSPVLEDYYDNWGNRCYIFSAELGKNYDFGKDSKKHIKQLDFNTEAFKKVGGEYVLSAVPIDNASEVGLQFEKAFDNKESYWKIYLYKATN |
3RCE Chain:A ((100-207)) | -------------------------------------------------------------------------------------------ESIILYMSTFFASLIVVPIILIAREYK-L----TTYGFIAALLGSIANSYYNRTMSGYYDTDMLVLVLPMLILLTFIRLTINKDIF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RCE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43964 for 414 contacts (-106.2/contact) +
2D Compatibility (PS) -7161 + (NN) 97 + (LL) 37904
1D Compatibility (HY) -6000 + (ID) 600
Total energy: -19724.0 ( -47.64 by residue)
QMean score : 0.046
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