Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLIPDNLLQPVVGKKQVEPKESLAEELVELPFISLLMENSPAPLIKGEADNEEQATIPLKEIAPSLVSAKLLDSEPETKLPSAPLELKEVKETLAAIAKQAIDQPKIDSAPQVAQPPEMNTPKEPTKNTTREQQPPPELIMPTKDSPKLAENVAKNQPALAKLPQEKEAVQLFKASIKEPVTAKEEVAVKKPAESSNIWHDTTKQLTPAAKVEVPVTLKQLDKTITDQIEQLQKFQVKQNKAFFAIQPESLGKVEVLLKKMPDKIFVHIEYQEQTA--KQKLEQMAQDLHNRFRDRGVEVAVTMTEKQAPKENGQGSEGRHHGESKKEKERENPHQEKAKQQVFDLEEET |
2YMB Chain:A ((146-198)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CEMLIK--CKVKTIHLLTSLDEGIEQVQQSRGLQEIEESLRSHGVLLEVQYSS-------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -14539 for 251 contacts (-57.9/contact) +
2D Compatibility (PS) -5498 + (NN) -2299 + (LL) 20324
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -5262.0 ( -20.96 by residue)
QMean score : 0.593
|
|
|