Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VRKLGLMTILFWMFLSVQAFAADLEPPMISLEKEQRVFTSGEVISFHVKNPEELKIVLVNEHGQRKLLDG-------------------ETYTVTDWDL---------DGNYQAEFYQADISKPVVTVEDLFEVK-QLEEVAKDETAPSLKM-IEITHDEDVLPTSVLYASAELDDAESGVKQAILLV--HSKSNESEMELIRNNYTGEFDAEIPLEK-FQLGE-----ELTFQLQLVDFAENEITLDLENTIQLYEPKAPVLSYDGSDITNVQKKIGQVGNRIELTLDKYTTEFPELETENGKTIPLLWQKTATEWKGSLALTTELSGEIIHIQEMNQYMLVRATSEPFGDIQLINNSILTGTIHPDFTFISNLYVEVNGQNFPIKRTDNSFTSAEITTTGKITLHWTDWDGQVFSKQMNQEIKPVIEMPDKETIAPPSVIPKEKESLLTSPDPKPSVESHENTPKKQEKKETSTKNKSSSIPFWIPALMIIGVIIFSGNRAMK |
| 1XF1 Chain:A ((734-922)) | -----------------------------------------------LRNAKNLVAEVLDKEGNVVWTSEVTEQVVKNYNNDLASTLGSTRFEKTRWDGKDKDGKVVANGTYTYRVRYTPISS------GA-KEQHTDFDVIVDNTTPEVATSATFSTEDR-------RLTLASKPKTSQPVYRERIAYTYMDEDLPTTEYISPNEDGTF--TLPEEAETMEGATVPLKMSDFTYVVEDMAGNITYTPVTKL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XF1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12208 for 900 contacts (13.6/contact) +
2D Compatibility (PS) -15400 + (NN) 3759 + (LL) 21320
1D Compatibility (HY) 1200 + (ID) 1350
Total energy: 21737.0 ( 24.15 by residue)
QMean score : 0.377
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