Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFNWYKKY---REEKRDYKQYKKRIAALPEDYKTAMKAIETYLWNFA-KGAGM--FEILKNVLEMFENAAADNLELKAVVGDDLAEFADNLLSEFPEETWMDKQRQKLRDSIK
2HH6 Chain:A ((1-110))
-MSFIEKMIGSLNDKREWKAMEARAKALPKEYHHAYKAIQKYMWTSGGPTDWQDTKRIFGGILDLFEEGAAEGKKVTDLTGEDVAAFCDELMKDT--KTWMDKYRTKLNDSIG
General information:
TITO was launched using:
RESULT:
Template:
2HH6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9511 for 531 contacts (-17.9/contact) +
2D Compatibility (PS) -10014 + (NN) -929 + (LL) 172
1D Compatibility (HY) 5600 + (ID) 500
Total energy: -15182.0 ( -28.59 by residue)
QMean score : 0.251
(partial model without unconserved sides chains):
PDB file :
Tito_2HH6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HH6-query.scw
PDB file :
Tito_Scwrl_2HH6.pdb
: