Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYRFLKFNINAGSVTLLVMFSSFFILSVILSTLLSMTWEFYAILSALVIVCFFNFKKFFPGEVAVSEEAFYYKSKAYPYSKYIIECDAKLIRFKSPSARAIPYYRIVIINKDTRAEKLIKVHNAARRYKGANTQMQVEMEELRDQLKQYQS |
| 2K88 Chain:A ((1-60)) | ------------------------------------------------------------------------------------------MVSQKNGIATLLQAEKEAHEIVSKARKYRQDKLKQAKTDAAKEIDSYKIQKDKELKEFEC--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7161 for 231 contacts (31.0/contact) +
2D Compatibility (PS) -6662 + (NN) -2559 + (LL) 8736
1D Compatibility (HY) 2800 + (ID) 200
Total energy: 9276.0 ( 40.16 by residue)
QMean score : 0.261
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