Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSITNLLNIKYPIIQGAMAQIAKAPLVAAVSNAGGLGIIASGGMTADMLREEIQKTKALTDKAFGVNLMLMMTNIAELTEVIIEEKVGIVTTGAGTPKTFMPIWKEAGIIVIPVVPSVMIAKRMEKMGADAVIAEGTEAGGHVGETTTMALLPQIVDAVTIPVIGAGGIADGRGIVAALALGAKGVQIGTRFLATDECPVHPDFKAAVIKASDRDTMVTGRKAGAPVRSIKNKMIKEYIRLE----EENADRDTLEELTLGSLRKAVQEGDTDNGSVMAGQIAGLITEIKPCKDVIEEMMTDAKKVIAGLELK |
2Z6J Chain:B ((5-310)) | --ITELLKIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGNPSKYMERFHEAGIIVIPVVPSVALAKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESNAHPNYKEKILKARDIDTTISAQ----AVRAIKNQLTRDFELAEKDAF---------EQMGAGALAKAVVHGDVDGGSVMAGQIAGLVSKEETAEEILKDLYYGAAKKI------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z6J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215889 for 2689 contacts (-80.3/contact) +
2D Compatibility (PS) -31379 + (NN) -10237 + (LL) 1300
1D Compatibility (HY) -26400 + (ID) 7500
Total energy: -290105.0 ( -107.89 by residue)
QMean score : 0.516
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