Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LDDKLQKKLTLLPESPGCYIYRDENNEILYIGKSKCLKNRVKSYFHSKQIGKTARLVRQIRDLELIITTSEKEALLLEMILIQKYQPPFNIQLKEGTSYPYIKITNEKNPHIEVVFEVKRDGAHYFGPYPGRFSARQTVDLIEKLFPLCRCDGKPGRPCLYYHLGLCLGPCQAEIEPAVYKKQIHKISRFLEGDVKNVKDKLLGDMLTATENLEFERAAELRDKIHAINETIEKQHIIFPGLKNRDIIGCYEQDNYLSVFVFFVRNGAINGSKWHVFQVEKTLQEELATFLNQFYEDPNNIQPKELLIAEKIDKSLLNEPLRKACLFPQKGSKKKQVDLAIENAKSAYIAYAKMKEYDFEIQLNNH |
1YD6 Chain:A ((2-95)) | -NERLKEKLAVLPEQPGCYLMKDKHGTVIYVGKAKSLKERVRSYFTGTHDGKTQRLVEEIADFEYIVTSSNAEALILEMNLIKKHDPKYNVMLKD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YD6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36625 for 643 contacts (-57.0/contact) +
2D Compatibility (PS) -9982 + (NN) -6590 + (LL) 18620
1D Compatibility (HY) -11200 + (ID) 2350
Total energy: -48127.0 ( -74.85 by residue)
QMean score : 0.599
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