Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNCEKCNQNPATIQLYMNINGKRVEMPLCASCYAEVRNQANFGSNEFPGASGSPFDDIFRQLSGAANQANREQRSQANAQVQTQTAGGGNGILDEFGTNLTDMAKNEQLDPVIGRDKEIKRVIEILNRRNKNNPVLIGEPGVGKTAVVEGLANAIVAGDVPSKLMNKEVILLDVASLVSGTGIRGQFEERMKQLIKELQERKNTILFIDEVHTIVGAGSAEGSMDAGNILKPALARGDLQMIGATTLKEYRTIEKDAALERRFQPVTVSEPSTKETLTILNGLKPKYEDFHEVVYSPEALTAAVELSARYIQDRHLPDKAIDLMDEVGSKYNLSIEKLDENTVSERVARLEDEKNQALQMEDYEKAAKVRDEITRLEENKTSNSFSERPVIQASDIQAIIEEKTGIPVGRLQEDEQSKMKNLERNLTGKVIGQEDAVKKVAKAIRRSRVGLKSKNRPIGSFLFVGPTGVGKTELGRTLARELFGTSEAMIRLDMSEFMEKHSISKLIGSPPGYVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSNAGATDTEASVGFNTTTETKLEKGS-------DILAKLGAYFKPEFLNRLDSVIEFKSLEKDDLVQIIDLMLVDLNEMLAQEGVTIDVSKEVKEHLIDLGYDPKFGARPLRRTIQEHLEDTIADSLIDQPEAKNLVATLNDNKEITITEQVTA |
4LJ7 Chain:C ((34-310)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGQTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPG------GGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLG----------SPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKIL-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LJ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135267 for 2018 contacts (-67.0/contact) +
2D Compatibility (PS) -29207 + (NN) -19100 + (LL) 30192
1D Compatibility (HY) -28400 + (ID) 7400
Total energy: -189182.0 ( -93.75 by residue)
QMean score : 0.562
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