Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEGFAVIGLGRFGGSICRSLVEQGMEVLAIDSDEERVNEYMSIATHAVIANSTDENALRQLGIRNFEHVIVAIGEDIQSSILTTLILKEMGVKYVTAKATNDKHAKLLDKIGADRVVHPERDMGRRIAHYIVSKNMLDYLELSDEYSLVEISVSDPRFLGKSLVDLDFRNSFGVNIVGIKKDKQMIITPEANDVLHEGDILIVIGSDDDIERLQEKIQ
4J91 Chain:D ((9-218))
----FAVIGLGRFGGSICKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSDENVLNYIDLSDEYSIVEL-LATRKLDSKSIIDLNVRAKYGCTILAIKHHGDICLS---EDIIREQDCLVIMGHKKDIKRFE----
General information:
TITO was launched using:
RESULT:
Template:
4J91.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148866 for 1532 contacts (-97.2/contact) +
2D Compatibility (PS) -21785 + (NN) -1434 + (LL) 776
1D Compatibility (HY) -25600 + (ID) 5500
Total energy: -202409.0 ( -132.12 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_4J91.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J91-query.scw
PDB file :
Tito_Scwrl_4J91.pdb
: