Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTMDDIVREGHPALREVATEVTFPLSDEEKKLGRDMLEFLINSQDEDLAEKYGLRGGVGIAAPQLAVTKRFLAIHVHDEKDRLYSYVLYNPKIRSHSVQQACLSGGEGCLSVDREVPGYVVRSERVTIDAFDENGTPLKLRFKGYPAIVIQHEIDHLNGIMFYDHINKENPSYLPPDVDVFG
2OKL Chain:B ((2-179))
MLTMKDVIREGDPILRNVAEEVSLPASEEDTTTLKEMIEFVINSQDPEMAEKYSLRPGIGLAAPQIGVSKKMIAVHVTDADGTLYSHALFNPKIISHSVERTYLQGGEGCLSVDREVPGYVPRYTRITVKATSINGEEVKLRLKGLPAIVFQHEIDHLNGVMFYDHINKENPFAAPDD-----
General information:
TITO was launched using:
RESULT:
Template:
2OKL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90474 for 1404 contacts (-64.4/contact) +
2D Compatibility (PS) -19036 + (NN) -9265 + (LL) 268
1D Compatibility (HY) -18800 + (ID) 5500
Total energy: -142807.0 ( -101.71 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_2OKL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OKL-query.scw
PDB file :
Tito_Scwrl_2OKL.pdb
: