Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNEALGLIEVTGFLGAVVAADTCLKAANVELIQCEVISGGLTTVELTGDVGAVNAAIEAGKAATEDLGCLVSSHVIARMSEDTKALFVPQEEAKPQPKEIKQEEPKEVIQKVVEVNTNTKSTEKKLRAMKVIDLRKLAYTLDNVPIPKSKIKYANKDKLVHALKDIYGRSEN
4AXJ Chain:C ((7-90))
----ALGMIETKGLVGAIEAADAMVKAANVQLVGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGELISVHVIPRPHFEVDAIL-------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4AXJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58760 for 665 contacts (-88.4/contact) +
2D Compatibility (PS) -8986 + (NN) -1539 + (LL) 6304
1D Compatibility (HY) -6800 + (ID) 2200
Total energy: -71981.0 ( -108.24 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_4AXJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AXJ-query.scw
PDB file :
Tito_Scwrl_4AXJ.pdb
: