Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANANALGMIETKGLVGAVEAADAMVKAANVTLMGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGELLSVHVIPRPHSEVDAILPKSAE
4AXJ Chain:C ((6-91))
----NALGMIETKGLVGAIEAADAMVKAANVQLVGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGELISVHVIPRPHFEVDAILP----
General information:
TITO was launched using:
RESULT:
Template:
4AXJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32064 for 686 contacts (-46.7/contact) +
2D Compatibility (PS) -9688 + (NN) -3557 + (LL) 700
1D Compatibility (HY) -11200 + (ID) 4050
Total energy: -59859.0 ( -87.26 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_4AXJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AXJ-query.scw
PDB file :
Tito_Scwrl_4AXJ.pdb
: