Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LSKIPVIVIVGPTAVGKTSLSIELAKKLDGEIISGDSMQVYRGLDIGTAKITPEEMDEIKHYLIDVTDPSEPFTAAKFQTETRKWIETIHQAGKLPIIVGGTGLYIQSVFYDYDFGNVSEDKAYRAELEQLNKTLLWQMLEQQ----DPESAAQIHENNKRRVIRALEVMHLTGKPFSE----------YQVHNVLNDTYKPLFLGLDLDRALLYERINQRVNLMFEEGLVTEAKKLY---DQHLVDVPAVCGIGYKELFPYFEGKSSLEEAKELIQKNSRHFAKRQLTWFRNRMEIDWIQAGVSTTEAEALNKAETFLSVK |
3FOZ Chain:B ((12-295)) | -----AIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLS-PLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQ---------FAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLH-TDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FOZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107046 for 2019 contacts (-53.0/contact) +
2D Compatibility (PS) -29157 + (NN) -14792 + (LL) 2892
1D Compatibility (HY) -18400 + (ID) 5450
Total energy: -171953.0 ( -85.17 by residue)
QMean score : 0.530
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