Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKKKIDWRDERGFTLVEMLIVLLVVSVLLLLTIPNIVSQSKSINDKGCEAFISMVQGQVQSYQLDKNSIPSVADLVSGGYLKANQKSCPNGNSIKIDSSGNVSEKK
1Q90 Chain:G ((2-14))
----------------VEPLLCGIVLGLV------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q90.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6367 for 45 contacts (-141.5/contact) +
2D Compatibility (PS) -1325 + (NN) -731 + (LL) 4748
1D Compatibility (HY) -2800 + (ID) 200
Total energy: -6675.0 ( -148.33 by residue)
QMean score : 0.239
(partial model without unconserved sides chains):
PDB file :
Tito_1Q90.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q90-query.scw
PDB file :
Tito_Scwrl_1Q90.pdb
: