Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTVSKDEIMKKATELRDALQQTEEVSFYRLAEERINANSKVAAKVSKIKLLQKEAVNLEHYQK---LEAMKQTENQIDNVRADIDSLPIVTEFRRAQEDANDLLQSITTEITTKVTTELEKEN
2QUP Chain:A ((42-121))
---RLQALMSKIDDQGKLLSETRTIEELRKYKELVKE--FVGDAVELGLRLEER----NRRGRTKIYKIVKEVDRKLLDLTDAVLA-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2QUP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8208 for 398 contacts (20.6/contact) +
2D Compatibility (PS) -8385 + (NN) -6946 + (LL) 3940
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -6883.0 ( -17.29 by residue)
QMean score : 0.669
(partial model without unconserved sides chains):
PDB file :
Tito_2QUP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QUP-query.scw
PDB file :
Tito_Scwrl_2QUP.pdb
: