Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKSYHVAVVGATGAVGTQMIELLEEAATFKIKQVSFLSSIRSAGKKLSFRGEEVTIQEATPESFEGVDIALFSAGGSVSKALAKEAVKRGAIVIDNTSAYRMDPTVPLVVPEVNEKALFSHNGIIANPNCSTIQMVAALEPIREAFGLNRIIVSTYQAVSGSGVSAIQELKDGSKAVLDNK----EFTPQIMPVKGDKKHYPIAFNALPQIDVFTENDYTYEEMKMINETKKIMEDNTIKVSATCVRIPVVSGHSESVYIEVDKEGITAKEIQNALKNAPGIVLEDDPANQVYPQAVQAAGKKEVFVGRIRADIDDPKGFHMWIVSDNLLKGAAWNSIQIAESLVKLAII
4R5H Chain:B ((3-347))----YTVAVVGATGAVGAQMIKMLEES-TLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNCSTIQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALPQIDVFTDNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIET-KEVAPIEEVKAAIAAFPGAVLEDDVAHQIYPQAINAVGSRDTFVGRIRKDLDAEKGIHMWVVSDNLLKGAAWNSVQIAETLHERGLV


General information:
TITO was launched using:
RESULT:

Template: 4R5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -183574 for 3045 contacts (-60.3/contact) +
2D Compatibility (PS) -36885 + (NN) -18861 + (LL) 364
1D Compatibility (HY) -36400 + (ID) 10950
Total energy: -286306.0 ( -94.02 by residue)
QMean score : 0.608

(partial model without unconserved sides chains):
PDB file : Tito_4R5H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R5H-query.scw
PDB file : Tito_Scwrl_4R5H.pdb: