Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLRLGSHVSMSGKKMLLGASEEAASYGSNTFMIYTGAPQNTRRKPIEELNIEAGLEHMKAHDMADIVVHAPYIINIGNSVKP-ETFELGVNFLQSEIERTRALGAKQIVLHPGAHVGEGADKGIKQIIQGLNEALIHDQDVQIALETMAGKGSECGRTFEELAQIIDGVTHNELLSVTFDTCHTHDAGYDIVNDFDGVLNQFDKIVGIDRLKVLHINDSKNERGAHKDRHANIGFGHIGFDALHYIVHHPQLADVPKILETPYVGGDKASKKAPYKWEIAMLKNGEFDPDLLNKIQNS |
3AAL Chain:A ((6-299)) | -LKIGSHVSMSGKKMLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHAPYIINIGN-TTNLDTFSLGVDFLRAEIERTEAIGAKQLVLHPGAHVGAGVEAGLRQIIRGLNEVLTREQNVQIALETMAGKGSECGRTFEELAYIIDGVAYNDKLSVCFDTCHTHDAGYDIVNDFDGVLEEFDRIIGLGRLKVLHINDSKNPRGSRKDRHENIGFGHIGFAALNYIVHHPQLEDIPKILETPYVGEDKNNKKPPYKHEIAMLRAQSFDDQLLEKIN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AAL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159884 for 2595 contacts (-61.6/contact) +
2D Compatibility (PS) -31776 + (NN) -13540 + (LL) 72
1D Compatibility (HY) -34000 + (ID) 11200
Total energy: -250328.0 ( -96.47 by residue)
QMean score : 0.568
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