Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYEYFPGFYDRLMDSELYDEWLEFSADFIGDAPKKVLDLACGTAEFALRLSFSGHQVTGVDLSKEMVAVAKEKVAAAEIDLPIIEQDMSKLALKQTFDVVTCFCDSLNYLETEQALEATIQAVSAHLEPNGLFLFDVHSVFKIEQGFKDYSYGDSDEEISTIWNSFPGEHPHSIEHELTFYILGEDDTYNRVDELHKERTYPIATYENLLKKFGFTKIDIYADFSHEKPNKTSERIFFAARK
1WZN Chain:C ((43-170))
----------------------------------RRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFFSTIMYFD-EEDLRKLFSKVAEALKPGGVFITD----------FPC-------GPV--VWNEQKGEEKLVI--------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WZN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85411 for 849 contacts (-100.6/contact) +
2D Compatibility (PS) -13642 + (NN) -10466 + (LL) 7392
1D Compatibility (HY) -13200 + (ID) 2150
Total energy: -117477.0 ( -138.37 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_1WZN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WZN-query.scw
PDB file :
Tito_Scwrl_1WZN.pdb
: